PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00484.1.g00240.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 406aa    MW: 40939.6 Da    PI: 9.1266
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00484.1.g00240.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.51.3e-3956149294
                           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssss 81 
                                   ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss
  Zmw_sc00484.1.g00240.1.am.mk  56 PPKRSSTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSS 136
                                   689******************************************************************999888888888 PP

                           TCP  82 asnsssgkaaksa 94 
                                   +s+ s++++ ++a
  Zmw_sc00484.1.g00240.1.am.mk 137 GSSFSIPAHLRAA 149
                                   8877777555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.2E-3961178IPR005333Transcription factor, TCP
PROSITE profilePS5136927.67562116IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MDITGDTGGG RRPNFPLQLL EKKEEQPSST SPAAAGGPNG SAAAQGGELQ VRKVEPPKRS  60
STKDRHTKVD GRGRRIRMPA ICAARVFQLT RELGHKTDGE TIEWLLQQAE PAVIAATGTG  120
TIPANFTSLN ISLRSSGSSF SIPAHLRAAG LPGSRFGGAR GDAWDRVVGL GFGGGGAEGP  180
ASATSSASSP LLLSFHSGSV AAAGGGTESI WTFPQSGSGG AATVYRGVPS GLHFMNFPAP  240
MALIPGGQQL GLAAPAGPAA AGGGTESIWT FPQSGSGGAA TVYRGVPSGL HFMNFPAPMA  300
LIPGGQQLGL AAPVGGGTDN GGGGEGHMGV LAALNASRAQ AVTVAAQNGA EGSRNRNAPT  360
ACIQHGSDHA MSAYWYYPRA APTATNQPQP VPNFPFPQLD DHGADA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001146064.11e-125uncharacterized protein LOC100279595
SwissprotQ9C9L24e-52TCP15_ARATH; Transcription factor TCP15
TrEMBLA0A096SD891e-132A0A096SD89_MAIZE; Uncharacterized protein
STRINGGRMZM2G142751_P011e-131(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479